Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase delta subunit | H009_12551 | Not Available | Positive | 2676595 - 2676915 | 12233.3 |
| sarcosine oxidase subunit alpha | H009_12556 | Not Available | Positive | 2676912 - 2679902 | 108707.0 |
| sarcosine oxidase gamma subunit | H009_12561 | Not Available | Positive | 2679916 - 2680470 | 19435.5 |
| serine hydroxymethyltransferase | H009_12566 | Not Available | Positive | 2680488 - 2681756 | 44375.2 |
| formyltetrahydrofolate deformylase | H009_12571 | Not Available | Positive | 2681880 - 2682764 | 32611.0 |
| fad-binding 9 siderophore-interacting domain-containing protein | H009_12576 | Not Available | Negative | 2682802 - 2683551 | 27973.4 |
| iron-hydroxamate transporter permease subunit | H009_12581 | Not Available | Negative | 2683548 - 2685518 | 67931.6 |
| iron-hydroxamate transporter substrate-binding subunit | H009_12586 | Not Available | Negative | 2685515 - 2686405 | 32014.4 |
| tonb-dependent siderophore receptor | H009_12591 | Not Available | Negative | 2686405 - 2688825 | 87536.1 |
| fecr protein | H009_12596 | Not Available | Negative | 2688942 - 2689898 | 33763.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


