Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | H009_12451 | Not Available | Negative | 2655670 - 2656590 | 33044.8 |
| isochorismatase hydrolase | H009_12456 | Not Available | Positive | 2656741 - 2657400 | 23884.7 |
| lysr family transcriptional regulator | H009_12461 | Not Available | Positive | 2657639 - 2658547 | 32885.6 |
| carbon-nitrogen hydrolase family protein | H009_12466 | Not Available | Positive | 2658695 - 2659477 | 28377.6 |
| putative demethylmenaquinone methyltransferase | H009_12471 | Not Available | Positive | 2659493 - 2660158 | 23572.9 |
| opine/polyamine abc transporter substrate-binding protein | H009_12476 | Not Available | Positive | 2660221 - 2661261 | 37078.7 |
| opine/polyamine abc transporter atpase | H009_12481 | Not Available | Positive | 2661520 - 2662611 | 39156.4 |
| opine/polyamine abc transporter permease | H009_12486 | Not Available | Positive | 2662608 - 2663486 | 31279.6 |
| opine/polyamine abc transporter permease | H009_12491 | Not Available | Positive | 2663500 - 2664294 | 28049.8 |
| fad dependent oxidoreductase | H009_12496 | Not Available | Positive | 2664439 - 2665836 | 49207.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


