Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconolactone delta-isomerase 1 | H009_12241 | Not Available | Negative | 2613521 - 2613811 | 11228.4 |
| putative mandelate racemase/muconate lactonizing enzyme | H009_12246 | Not Available | Negative | 2613816 - 2614970 | 41379.3 |
| lysr family transcriptional regulator | H009_12251 | Not Available | Positive | 2615062 - 2615994 | 35435.8 |
| pyridoxal phosphate aminotransferase | H009_12256 | Not Available | Negative | 2616688 - 2616891 | 7042.45 |
| pyridoxal-phosphate-dependent aminotransferase | H009_12261 | Not Available | Negative | 2616919 - 2617212 | 9601.36 |
| putative abc transporter periplasmic protein | H009_12266 | Not Available | Positive | 2617694 - 2617990 | 10573.3 |
| oligopeptide abc transporter substrate-binding protein | H009_12271 | Not Available | Positive | 2618245 - 2619783 | 57081.3 |
| oligopeptide abc transporter (permease) | H009_12276 | Not Available | Positive | 2619780 - 2620697 | 32932.6 |
| oligopeptide abc transporter (permease) | H009_12281 | Not Available | Positive | 2620709 - 2621599 | 31550.4 |
| abc transporter | H009_12286 | Not Available | Positive | 2621596 - 2623284 | 60481.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


