Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-interacting protein | H009_07696 | Not Available | Positive | 1650614 - 1651453 | 30743.2 |
| hypothetical protein | H009_07701 | Not Available | Positive | 1651446 - 1651724 | 10141.3 |
| agrobactine synthetase subunit f | H009_07706 | Not Available | Positive | 1651787 - 1654621 | 102227.0 |
| agrobactine synthetase subunit f | H009_07711 | Not Available | Negative | 1654823 - 1656169 | 50134.5 |
| non-ribosomal peptide synthetase basa/d | H009_07716 | Not Available | Negative | 1656230 - 1660666 | 160475.0 |
| isochorismate synthase | H009_07721 | Not Available | Positive | 1660766 - 1661941 | 42797.8 |
| enterobactin synthase subunit e | H009_07726 | Not Available | Positive | 1661960 - 1663585 | 59213.8 |
| 2,3-dihydro-2,3-dihydroxybenzoate synthetase | H009_07731 | Not Available | Positive | 1663684 - 1664553 | 32201.9 |
| 2,3-dihydroxybenzoate-2,3-dehydrogenase | H009_07736 | Not Available | Positive | 1664567 - 1665322 | 26431.9 |
| phosphopantetheinyl transferase | H009_07741 | Not Available | Positive | 1665407 - 1666120 | 26062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


