Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H480_04872 | Not Available | Positive | 1013039 - 1015440 | 87666.6 |
| rna polymerase sigma-70 factor, ecf subfamily protein | H480_04877 | Not Available | Negative | 1015466 - 1016347 | 31381.5 |
| alpha-l-fucosidase/alpha-galactosidase | H480_04882 | Not Available | Negative | 1016470 - 1019259 | 101564.0 |
| alpha-l-fucosidase/alpha-galactosidase | H480_04887 | Not Available | Positive | 1019144 - 1019539 | 13322.7 |
| hypothetical protein | H480_04892 | Not Available | Negative | 1019528 - 1020151 | 22532.6 |
| peptidase s8 and s53 subtilisin kexin sedolisin | H480_04897 | Not Available | Negative | 1020269 - 1021483 | 40416.8 |
| hypothetical protein | H480_04902 | Not Available | Positive | 1021834 - 1024086 | 78647.8 |
| hypothetical protein | H480_04907 | Not Available | Negative | 1024136 - 1025029 | 30769.9 |
| erythromycin esterase | H480_04912 | Not Available | Negative | 1025147 - 1026139 | 35872.9 |
| merr family transcriptional regulator | H480_04917 | Not Available | Positive | 1026169 - 1026858 | 24437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
