Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | H480_42910 | Not Available | Negative | 8633044 - 8633568 | 19140.1 |
| dienelactone hydrolase | H480_42915 | Not Available | Negative | 8633635 - 8634540 | 31752.4 |
| helix-turn-helix domain-containing protein | H480_42920 | Not Available | Positive | 8634679 - 8635593 | 33353.6 |
| putative peptidase c14 caspase catalytic subunit p20 | H480_42925 | Not Available | Negative | 8635510 - 8638067 | 93803.2 |
| transglutaminase | H480_42930 | Not Available | Positive | 8638068 - 8640031 | 70144.1 |
| dna polymerase iv | H480_42945 | Not Available | Negative | 8641036 - 8642286 | 44299.6 |
| methyltransferase | H480_42950 | Not Available | Negative | 8642393 - 8643048 | 21949.0 |
| major facilitator transporter | H480_42955 | Not Available | Positive | 8643049 - 8643506 | 15114.6 |
| formate dehydrogenase accessory protein | H480_42960 | Not Available | Positive | 8643535 - 8644341 | 27900.4 |
| lysr family transcriptional regulator | H480_42965 | Not Available | Negative | 8644329 - 8645126 | 27547.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
