Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H480_42490 | Not Available | Positive | 8559806 - 8560054 | 7085.17 |
| hypothetical protein | H480_42495 | Not Available | Positive | 8560047 - 8560847 | 28843.5 |
| hypothetical protein | H480_42500 | Not Available | Positive | 8560844 - 8561182 | 12873.5 |
| hypothetical protein | H480_42515 | Not Available | Negative | 8562632 - 8563324 | 26362.1 |
| protoporphyrinogen oxidase | H480_42520 | Not Available | Negative | 8563441 - 8564301 | 28660.2 |
| sarp family transcriptional regulator fused with atpase domain | H480_42525 | Not Available | Positive | 8564302 - 8564497 | 6370.61 |
| gntr family transcriptional regulator | H480_42530 | Not Available | Positive | 8564831 - 8565601 | 28568.9 |
| hypothetical protein | H480_42535 | Not Available | Negative | 8565606 - 8566913 | 46438.9 |
| pts system mannose/sorbose-specific transporter subunit iia | H480_42540 | Not Available | Negative | 8566910 - 8567302 | 13576.4 |
| pts system mannose/fructose-specific transporter subunit iicd | H480_42545 | Not Available | Negative | 8567314 - 8568683 | 48136.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
