Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyglutaryl-coa dehydratase subunit d | H480_41715 | Not Available | Positive | 8399054 - 8400277 | 46085.1 |
| family 3 extracellular solute-binding protein | H480_41720 | Not Available | Positive | 8400377 - 8401210 | 29072.5 |
| hypothetical protein | H480_41725 | Not Available | Positive | 8401249 - 8401590 | 11375.5 |
| hypothetical protein | H480_41730 | Not Available | Positive | 8401557 - 8402162 | 21268.7 |
| hypothetical protein | H480_41735 | Not Available | Positive | 8402159 - 8403550 | 48262.5 |
| abc transporter substrate-binding protein | H480_41740 | Not Available | Positive | 8403805 - 8404992 | 42691.3 |
| sugar abc transporter permease | H480_41745 | Not Available | Positive | 8405018 - 8405917 | 32285.8 |
| sugar abc transporter permease | H480_41750 | Not Available | Positive | 8405917 - 8406789 | 31344.8 |
| gntr family transcriptional regulator | H480_41755 | Not Available | Negative | 8406807 - 8407535 | 26573.8 |
| racemase | H480_41760 | Not Available | Positive | 8407652 - 8408836 | 42045.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
