Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | H480_40765 | Not Available | Negative | 8202498 - 8203268 | 26633.4 |
| pectate lyase | H480_40770 | Not Available | Negative | 8203479 - 8204771 | 45890.6 |
| hypothetical protein | H480_40775 | Not Available | Negative | 8204857 - 8205804 | 34548.4 |
| oxidoreductase domain-containing protein | H480_40780 | Not Available | Negative | 8205801 - 8207021 | 44556.6 |
| oxidoreductase | H480_40785 | Not Available | Negative | 8207035 - 8207197 | 5535.6 |
| trypsin-like protein | H480_40790 | Not Available | Positive | 8207338 - 8208390 | 34867.7 |
| integral membrane protein | H480_40795 | Not Available | Negative | 8208435 - 8208695 | 9146.75 |
| beta-lactamase class b | H480_40800 | Not Available | Negative | 8208801 - 8209694 | 33124.0 |
| xre family transcriptional regulator | H480_40805 | Not Available | Negative | 8209771 - 8210370 | 21596.8 |
| two-component system histidine kinase | H480_40810 | Not Available | Negative | 8210371 - 8211657 | 45860.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
