Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H480_40545 | Not Available | Negative | 8158923 - 8160146 | 44222.5 |
| aromatic compounds degradation protein paai | H480_40550 | Not Available | Negative | 8160257 - 8160619 | 12820.4 |
| hypothetical protein | H480_40555 | Not Available | Negative | 8160745 - 8162466 | 61608.8 |
| hypothetical protein | H480_40560 | Not Available | Negative | 8162632 - 8163042 | 13853.2 |
| sugar abc transporter permease | H480_40565 | Not Available | Negative | 8163096 - 8163881 | 28777.4 |
| sugar abc transporter permease | H480_40570 | Not Available | Negative | 8163911 - 8164807 | 33139.8 |
| sugar abc transporter periplasmic protein | H480_40575 | Not Available | Negative | 8164804 - 8166054 | 43906.7 |
| long-chain-fatty-acid--coa ligase | H480_40580 | Not Available | Negative | 8166194 - 8167822 | 58916.0 |
| integration host factor | H480_40585 | Not Available | Positive | 8168283 - 8168579 | 10442.8 |
| isochorismate synthase | H480_40590 | Not Available | Positive | 8168661 - 8169878 | 42406.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
