Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | H480_03982 | Not Available | Positive | 804492 - 805125 | 22538.2 |
| hypothetical protein | H480_03987 | Not Available | Negative | 805286 - 806857 | 58391.8 |
| glycosyl hydrolase/beta-1,4-xylanase | H480_03992 | Not Available | Positive | 807005 - 809236 | 78926.7 |
| hypothetical protein | H480_03997 | Not Available | Positive | 809322 - 809534 | 7932.27 |
| anti-sigma regulatory factor, serine/threonine protein kinase | H480_04002 | Not Available | Negative | 809821 - 810243 | 14909.6 |
| transcription termination factor rho | H480_04007 | Not Available | Positive | 810590 - 811651 | 37936.8 |
| hypothetical protein | H480_04012 | Not Available | Negative | 811656 - 811832 | 6362.12 |
| hypothetical protein | H480_04017 | Not Available | Negative | 811844 - 812122 | 9627.05 |
| hypothetical protein | H480_04022 | Not Available | Negative | 812406 - 812594 | 6748.63 |
| hypothetical protein | H480_04027 | Not Available | Negative | 812673 - 813167 | 18108.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
