Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | H480_36528 | Not Available | Negative | 7392649 - 7393464 | 30112.1 |
| hypothetical protein | H480_36543 | Not Available | Negative | 7394099 - 7394797 | 24569.1 |
| arac family transcriptional regulator | H480_36548 | Not Available | Negative | 7394872 - 7395819 | 33601.9 |
| epoxide hydrolase domain-containing protein | H480_36553 | Not Available | Positive | 7395901 - 7397022 | 41597.3 |
| succinate-semialdehyde dehydrogenase (nad(p)+) | H480_36558 | Not Available | Positive | 7397103 - 7398473 | 49169.1 |
| 3-hydroxyisobutyrate dehydrogenase | H480_36563 | Not Available | Positive | 7398515 - 7399378 | 29192.8 |
| integral membrane protein | H480_36568 | Not Available | Positive | 7399382 - 7400560 | 41805.9 |
| hypothetical protein | H480_36573 | Not Available | Positive | 7400615 - 7401166 | 20818.7 |
| shikimate dehydrogenase | H480_36578 | Not Available | Negative | 7401224 - 7401473 | 8521.47 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | H480_36583 | Not Available | Negative | 7401446 - 7402702 | 45275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
