Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | H480_36008 | Not Available | Negative | 7259075 - 7259914 | 30248.4 |
| spermidine/putrescine abc transporter substrate-binding protein | H480_36013 | Not Available | Negative | 7260046 - 7261248 | 43053.6 |
| spermidine/putrescine abc transporter atpase | H480_36018 | Not Available | Negative | 7261266 - 7262354 | 39504.0 |
| betaine-aldehyde dehydrogenase | H480_36023 | Not Available | Negative | 7262351 - 7263772 | 50634.2 |
| gntr family transcriptional regulator | H480_36028 | Not Available | Positive | 7263880 - 7264614 | 25967.9 |
| hypothetical protein | H480_36033 | Not Available | Positive | 7264649 - 7265356 | 25161.9 |
| hypothetical protein | H480_36038 | Not Available | Positive | 7265381 - 7265992 | 22108.2 |
| pucr family transcriptional regulator | H480_36043 | Not Available | Negative | 7265948 - 7266370 | 15013.0 |
| transcriptional accessory protein | H480_36048 | Not Available | Negative | 7266371 - 7268593 | 80543.0 |
| chitinase | H480_36053 | Not Available | Positive | 7268739 - 7270226 | 50776.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
