Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m52/hydrogen uptake protein | H480_35548 | Not Available | Positive | 7172800 - 7173303 | 17410.9 |
| hydrogenase assembly chaperone hypc/hupf | H480_35553 | Not Available | Positive | 7173411 - 7173683 | 9707.64 |
| hydrogenase isoenzymes formation protein hypd | H480_35558 | Not Available | Positive | 7173692 - 7174819 | 41512.4 |
| hydrogenase expression/formation protein hype | H480_35563 | Not Available | Positive | 7174816 - 7175892 | 37034.7 |
| hydrogenase nickel incorporation protein hypa | H480_35568 | Not Available | Positive | 7175955 - 7176290 | 11668.1 |
| hydrogenase nickel incorporation protein hypb | H480_35573 | Not Available | Positive | 7176283 - 7176978 | 24944.8 |
| hydrogenase maturation protein hypf | H480_35578 | Not Available | Negative | 7176935 - 7179094 | 77827.0 |
| hypothetical protein | H480_35583 | Not Available | Negative | 7179127 - 7179711 | 21288.4 |
| thioredoxin-like protein | H480_35588 | Not Available | Negative | 7179726 - 7180211 | 16609.9 |
| hydrogenase small subunit | H480_35593 | Not Available | Negative | 7180208 - 7181227 | 35715.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
