Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen/lipopolysaccharide abc transporter atp-binding protein rfbe | H480_35198 | Not Available | Positive | 7111001 - 7111249 | 8577.34 |
| glycosyl transferase | H480_35203 | Not Available | Negative | 7111275 - 7112360 | 38591.4 |
| glycosyl transferase | H480_35208 | Not Available | Negative | 7112353 - 7114072 | 62461.5 |
| hypothetical protein | H480_35213 | Not Available | Positive | 7114073 - 7114952 | 30275.9 |
| multidrug abc transporter atpase | H480_35218 | Not Available | Negative | 7114927 - 7115892 | 34001.9 |
| mbth protein | H480_35223 | Not Available | Negative | 7115892 - 7116095 | 7357.5 |
| abc transporter | H480_35228 | Not Available | Negative | 7116172 - 7116978 | 27839.8 |
| non-ribosomal peptide synthetase | H480_35233 | Not Available | Negative | 7116981 - 7118285 | 45815.4 |
| mmpl domain-containing protein | H480_35238 | Not Available | Positive | 7118286 - 7120041 | 59586.0 |
| hypothetical protein | H480_35243 | Not Available | Positive | 7120052 - 7120200 | 4447.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
