Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate 5-dehydrogenase | H480_33680 | Not Available | Negative | 6837926 - 6838330 | 14111.0 |
| heavy metal-transporting atpase | H480_33685 | Not Available | Negative | 6838444 - 6840672 | 76852.2 |
| hypothetical protein | H480_33690 | Not Available | Negative | 6840669 - 6841568 | 30653.6 |
| copper chaperone | H480_33695 | Not Available | Negative | 6841583 - 6841789 | 7019.24 |
| polysaccharide lyase | H480_33700 | Not Available | Positive | 6842041 - 6843201 | 40071.0 |
| yggt family protein | H480_33705 | Not Available | Positive | 6843300 - 6843575 | 9838.62 |
| tetr family transcriptional regulator | H480_33710 | Not Available | Negative | 6843572 - 6844222 | 23121.6 |
| fad-dependent oxidoreductase | H480_33715 | Not Available | Positive | 6844344 - 6845534 | 42334.3 |
| abc transporter substrate-binding protein | H480_33720 | Not Available | Positive | 6845580 - 6846590 | 34908.7 |
| methyltransferase type 11 | H480_33725 | Not Available | Negative | 6846587 - 6847333 | 27248.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
