Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein ychf | H480_32213 | Not Available | Negative | 6546458 - 6547540 | 39144.6 |
| adenosine deaminase/dna-3-methyladenine glycosylase/8-oxoguanine dna glycosylase | H480_32218 | Not Available | Positive | 6547631 - 6549091 | 52525.0 |
| hypothetical protein | H480_32223 | Not Available | Negative | 6549017 - 6549208 | 6939.17 |
| exonuclease sbcc | H480_32228 | Not Available | Negative | 6549230 - 6550621 | 49063.4 |
| xre family transcriptional regulator | H480_32233 | Not Available | Negative | 6550622 - 6552720 | 73288.0 |
| sel1 domain-containing protein repeat-containing protein | H480_32238 | Not Available | Negative | 6552767 - 6555772 | 108198.0 |
| endoglucanase | H480_32243 | Not Available | Positive | 6556486 - 6558003 | 54027.7 |
| hypothetical protein | H480_32248 | Not Available | Positive | 6558128 - 6559093 | 34091.1 |
| carbohydrate binding family 6 | H480_32253 | Not Available | Negative | 6559096 - 6559950 | 30186.3 |
| hypothetical protein | H480_32258 | Not Available | Positive | 6560216 - 6561316 | 39240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
