Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | H480_29721 | Not Available | Positive | 6047399 - 6048094 | 25477.8 |
| two-component system histidine kinase | H480_29726 | Not Available | Positive | 6048098 - 6049381 | 45450.5 |
| two-component system response regulator | H480_29731 | Not Available | Negative | 6049378 - 6050010 | 23004.9 |
| two-component system response regulator | H480_29736 | Not Available | Negative | 6050115 - 6050759 | 22529.3 |
| nucleotide-diphosphate-sugar epimerase/nmra family protein | H480_29741 | Not Available | Negative | 6050781 - 6051629 | 30176.6 |
| mfs multidrug efflux protein | H480_29746 | Not Available | Negative | 6051626 - 6052858 | 41712.0 |
| gtra-like protein | H480_29751 | Not Available | Negative | 6053157 - 6053675 | 19609.3 |
| rna polymerase sigma factor | H480_29756 | Not Available | Negative | 6053775 - 6054780 | 34264.4 |
| transposase | H480_29761 | Not Available | Positive | 6055005 - 6056007 | 37437.8 |
| shikimate 5-dehydrogenase | H480_29776 | Not Available | Negative | 6057491 - 6058339 | 29458.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
