Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soluble pyridine nucleotide transhydrogenase | H480_29241 | Not Available | Positive | 5955515 - 5956927 | 50361.4 |
| radical sam domain-containing protein | H480_29246 | Not Available | Positive | 5957178 - 5958893 | 61964.1 |
| phenolpthiocerol synthesis type-i polyketide synthase ppsd | H480_29251 | Not Available | Negative | 5958894 - 5961227 | 80011.1 |
| major facilitator transporter | H480_29266 | Not Available | Negative | 5963052 - 5964063 | 33516.6 |
| abc transporter permease | H480_29271 | Not Available | Positive | 5964064 - 5965892 | 61993.1 |
| endo-1,4-beta-xylanase | H480_29276 | Not Available | Positive | 5966124 - 5966789 | 24174.9 |
| xylanase/chitin deacetylase | H480_29281 | Not Available | Positive | 5966792 - 5967454 | 22967.1 |
| hypothetical protein | H480_29286 | Not Available | Negative | 5967502 - 5968176 | 23841.8 |
| hypothetical protein | H480_29291 | Not Available | Negative | 5968246 - 5968458 | 7552.8 |
| hypothetical protein | H480_29306 | Not Available | Positive | 5969855 - 5970644 | 27322.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
