Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily protein | H480_28716 | Not Available | Positive | 5859759 - 5860613 | 31110.3 |
| hypothetical protein | H480_28721 | Not Available | Negative | 5860610 - 5861236 | 21795.4 |
| rrna (guanine-n1-)-methyltransferase | H480_28726 | Not Available | Negative | 5861255 - 5861953 | 25136.1 |
| ammonium transporter | H480_28731 | Not Available | Positive | 5862308 - 5863663 | 46334.5 |
| nitrogen regulatory protein p-ii | H480_28736 | Not Available | Positive | 5863660 - 5863998 | 12175.7 |
| pii uridylyl-transferase | H480_28741 | Not Available | Positive | 5864009 - 5866321 | 81887.2 |
| ggdef domain-containing diguanylate cyclase | H480_28746 | Not Available | Negative | 5866318 - 5867622 | 46282.8 |
| short-chain dehydrogenase | H480_28751 | Not Available | Negative | 5868115 - 5868867 | 25058.5 |
| tetr family transcriptional regulator | H480_28756 | Not Available | Negative | 5868891 - 5869475 | 20979.1 |
| hypothetical protein | H480_28761 | Not Available | Positive | 5869596 - 5869958 | 12092.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
