Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | H480_28566 | Not Available | Negative | 5834851 - 5835222 | 13047.2 |
| oxidoreductase | H480_28571 | Not Available | Positive | 5835367 - 5835580 | 7615.2 |
| hypothetical protein | H480_28576 | Not Available | Positive | 5835583 - 5835756 | 6456.54 |
| glyoxalase/bleomycin resistance protein/dioxygenase | H480_28581 | Not Available | Negative | 5835757 - 5835960 | 7334.71 |
| tetr family transcriptional regulator | H480_28586 | Not Available | Negative | 5836148 - 5836774 | 22801.6 |
| carboxymuconolactone decarboxylase | H480_28591 | Not Available | Positive | 5836849 - 5837553 | 25165.9 |
| transposase fusion protein | H480_28596 | Not Available | Positive | 5837618 - 5838184 | 20673.9 |
| hypothetical protein | H480_28601 | Not Available | Positive | 5838312 - 5839082 | 26345.3 |
| rna polymerase sigma-70 factor, ecf subfamily protein | H480_28606 | Not Available | Negative | 5839063 - 5840004 | 33790.8 |
| dna primase | H480_28611 | Not Available | Positive | 5840068 - 5841471 | 51455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
