Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | H480_27376 | Not Available | Positive | 5611326 - 5612572 | 44571.7 |
| hypothetical protein | H480_27381 | Not Available | Negative | 5612578 - 5613650 | 37133.5 |
| ribulose-phosphate 3-epimerase | H480_27396 | Not Available | Positive | 5614888 - 5615559 | 23198.7 |
| riboflavin synthase alpha chain | H480_27401 | Not Available | Positive | 5615652 - 5616281 | 21899.9 |
| gtp cyclohydrolase ii/3,4-dihydroxy 2-butanone 4-phosphate synthase | H480_27406 | Not Available | Positive | 5616278 - 5617606 | 47279.9 |
| riboflavin synthase beta chain | H480_27411 | Not Available | Positive | 5617603 - 5618109 | 17878.1 |
| hypothetical protein | H480_27416 | Not Available | Positive | 5618106 - 5618549 | 15996.9 |
| exodeoxyribonuclease iii | H480_27421 | Not Available | Negative | 5618619 - 5619395 | 28262.4 |
| trypsin-like serine protease | H480_27426 | Not Available | Negative | 5619460 - 5620182 | 23895.7 |
| excinuclease abc subunit c | H480_27431 | Not Available | Positive | 5620432 - 5622330 | 70197.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
