Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | H480_02641 | Not Available | Positive | 512667 - 513710 | 36690.6 |
| sugar abc transporter periplasmic protein | H480_02646 | Not Available | Positive | 513826 - 514800 | 34112.7 |
| sugar abc transporter atpase | H480_02651 | Not Available | Positive | 514904 - 516406 | 53925.3 |
| sugar abc transporter permease | H480_02656 | Not Available | Positive | 516448 - 517455 | 34665.6 |
| inner membrane abc transporter permease protein yjff | H480_02661 | Not Available | Positive | 517452 - 518435 | 34147.8 |
| alpha-n-arabinofuranosidase | H480_02666 | Not Available | Positive | 518465 - 522277 | 131502.0 |
| ribulokinase | H480_02671 | Not Available | Positive | 522348 - 523976 | 57381.1 |
| l-ribulose-5-phosphate 4-epimerase | H480_02676 | Not Available | Positive | 523976 - 524896 | 32663.9 |
| l-arabinose isomerase | H480_02681 | Not Available | Positive | 524913 - 526412 | 53589.9 |
| sugar abc transporter periplasmic protein | H480_02686 | Not Available | Positive | 526430 - 527533 | 38984.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
