Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pila | H480_25473 | Not Available | Positive | 5203189 - 5203524 | 11484.7 |
| type iv pilus assembly protein pilt | H480_25478 | Not Available | Positive | 5203582 - 5204670 | 39283.3 |
| type iv pilus assembly protein pilb | H480_25483 | Not Available | Positive | 5204667 - 5206196 | 54954.3 |
| type iv pilus assembly protein pilc | H480_25488 | Not Available | Positive | 5206193 - 5207398 | 44162.4 |
| hypothetical protein | H480_25493 | Not Available | Positive | 5207832 - 5208458 | 21596.8 |
| hypothetical protein | H480_25498 | Not Available | Positive | 5208455 - 5210467 | 67755.3 |
| leader peptidase (prepilin peptidase)/n-methyltransferase | H480_25503 | Not Available | Negative | 5210472 - 5211251 | 26754.6 |
| universal stress protein | H480_25508 | Not Available | Positive | 5211544 - 5212129 | 19526.2 |
| marr family transcriptional regulator | H480_25513 | Not Available | Positive | 5212323 - 5212709 | 13765.5 |
| haloalkane dehalogenase | H480_25518 | Not Available | Positive | 5212715 - 5213563 | 31070.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
