Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily protein | H480_24522 | Not Available | Positive | 4995798 - 4996283 | 17917.2 |
| transmembrane anti-sigma factor | H480_24527 | Not Available | Positive | 4996280 - 4996930 | 22586.1 |
| prepilin signal peptidase pulo-like peptidase | H480_24532 | Not Available | Positive | 4997355 - 4997975 | 20168.0 |
| chorismate synthase | H480_24537 | Not Available | Positive | 4998019 - 4999206 | 41784.9 |
| shikimate kinase | H480_24542 | Not Available | Positive | 4999218 - 4999727 | 17443.8 |
| 3-dehydroquinate synthase | H480_24547 | Not Available | Positive | 4999736 - 5000848 | 38731.7 |
| 3-dehydroquinate dehydratase ii | H480_24552 | Not Available | Positive | 5000845 - 5001276 | 15334.2 |
| gcn5-related n-acetyltransferase | H480_24557 | Not Available | Positive | 5001273 - 5002178 | 32619.7 |
| hypothetical protein | H480_24562 | Not Available | Positive | 5002395 - 5003873 | 50503.4 |
| hypothetical protein | H480_24567 | Not Available | Negative | 5003957 - 5004346 | 13103.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
