Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atpase | H480_23492 | Not Available | Positive | 4802355 - 4803872 | 54203.9 |
| sugar abc transporter permease | H480_23497 | Not Available | Positive | 4803893 - 4804909 | 34422.8 |
| sugar abc transporter permease | H480_23502 | Not Available | Positive | 4804902 - 4805891 | 34081.5 |
| sugar abc transporter periplasmic protein | H480_23507 | Not Available | Positive | 4805888 - 4806958 | 37032.7 |
| l-rhamnose mutarotase | H480_23512 | Not Available | Positive | 4806958 - 4807293 | 12768.9 |
| l-rhamnose isomerase-like protein | H480_23517 | Not Available | Positive | 4807299 - 4808465 | 42557.4 |
| short chain dehydrogenase | H480_23522 | Not Available | Positive | 4808468 - 4810486 | 70324.5 |
| l-arabinose isomerase | H480_23527 | Not Available | Positive | 4810497 - 4811918 | 50807.7 |
| rhamnulokinase | H480_23532 | Not Available | Positive | 4811924 - 4813321 | 48845.3 |
| signal transduction protein with nacht domain | H480_23537 | Not Available | Negative | 4813264 - 4818223 | 180046.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
