Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | H480_23292 | Not Available | Positive | 4754161 - 4756074 | 70289.5 |
| hypothetical protein | H480_23297 | Not Available | Negative | 4756135 - 4756542 | 14676.5 |
| hypothetical protein | H480_23302 | Not Available | Positive | 4756619 - 4757677 | 36547.4 |
| nucleoside-triphosphate pyrophosphatase | H480_23307 | Not Available | Positive | 4757674 - 4758600 | 32713.8 |
| ecf subfamily rna polymerase sigma-24 factor | H480_23312 | Not Available | Positive | 4758802 - 4759055 | 9454.15 |
| lysr family transcriptional regulator | H480_23317 | Not Available | Negative | 4759056 - 4759608 | 19439.6 |
| beta-lactamase class b | H480_23322 | Not Available | Positive | 4759685 - 4760572 | 31741.6 |
| oxidoreductase | H480_23327 | Not Available | Negative | 4760579 - 4762111 | 53990.2 |
| rio kinase 1 | H480_23332 | Not Available | Positive | 4762394 - 4763353 | 35765.1 |
| atp-dependent rna helicase | H480_23337 | Not Available | Positive | 4763679 - 4765047 | 48984.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
