Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing diguanylate cyclase | H480_02074 | Not Available | Positive | 409948 - 411222 | 44707.2 |
| hypothetical protein | H480_02079 | Not Available | Positive | 411589 - 412983 | 50569.7 |
| tryptophan synthase subunit beta | H480_02084 | Not Available | Negative | 413028 - 414380 | 48816.2 |
| arginase | H480_02089 | Not Available | Positive | 414446 - 415306 | 29601.2 |
| carboxymethylenebutenolidase | H480_02094 | Not Available | Positive | 415303 - 415965 | 22999.3 |
| serine protease | H480_02099 | Not Available | Negative | 416003 - 417157 | 39560.5 |
| hypothetical protein | H480_02104 | Not Available | Positive | 417312 - 417821 | 18028.1 |
| aminoglycoside 3-n-acetyltransferase | H480_02109 | Not Available | Negative | 417858 - 418682 | 29189.4 |
| hypothetical protein | H480_02114 | Not Available | Negative | 418727 - 420919 | 79090.0 |
| sigma-70 family rna polymerase | H480_02119 | Not Available | Negative | 420919 - 421497 | 21395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
