Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-like protein | H480_20060 | Not Available | Positive | 4111547 - 4112251 | 25672.3 |
| na+/h+ antiporter-like protein | H480_20065 | Not Available | Positive | 4112255 - 4113445 | 40200.7 |
| rna polymerase sigma-70 factor, ecf subfamily protein | H480_20070 | Not Available | Positive | 4113487 - 4114128 | 23436.8 |
| transmembrane anti-sigma factor | H480_20075 | Not Available | Positive | 4114125 - 4114355 | 8474.93 |
| glycoside hydrolase family protein | H480_20080 | Not Available | Positive | 4114474 - 4117608 | 112418.0 |
| regulator of sigma subunit, anti-anti-sigma factor rsbu | H480_20085 | Not Available | Positive | 4117770 - 4119758 | 69741.0 |
| hypothetical protein | H480_20090 | Not Available | Negative | 4119786 - 4121205 | 49318.9 |
| gaf sensor protein | H480_20095 | Not Available | Negative | 4121206 - 4121594 | 13475.9 |
| Trna-gly | Not Available | Not Available | Positive | 4126380 - 4126453 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 4126534 - 4126607 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
