Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H480_17235 | Not Available | Negative | 3549294 - 3550106 | 29666.2 |
| hypothetical protein | H480_17240 | Not Available | Negative | 3550183 - 3550437 | 8946.33 |
| cold shock protein cspa | H480_17245 | Not Available | Negative | 3551109 - 3552041 | 32077.2 |
| ornithine cyclodeaminase | H480_17250 | Not Available | Negative | 3552159 - 3553085 | 31955.2 |
| pentapeptide repeat-containing protein | H480_17255 | Not Available | Positive | 3553128 - 3553736 | 21800.5 |
| molybdopterin binding domain-containing oxidoreductase | H480_17260 | Not Available | Positive | 3553766 - 3554365 | 22489.3 |
| oxidoreductase fad-binding region | H480_17265 | Not Available | Positive | 3554383 - 3555078 | 24932.8 |
| hypothetical protein | H480_17270 | Not Available | Positive | 3555172 - 3557805 | 92716.5 |
| hypothetical protein | H480_17275 | Not Available | Positive | 3557893 - 3560094 | 77529.0 |
| luxr family transcriptional regulator | H480_17280 | Not Available | Negative | 3560091 - 3561829 | 59667.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
