Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na-ca exchanger/integrin-beta4 | H480_15446 | Not Available | Positive | 3189704 - 3190483 | 25692.5 |
| sarp family transcriptional regulator | H480_15451 | Not Available | Negative | 3190467 - 3193457 | 106066.0 |
| von willebrand factor type a | H480_15456 | Not Available | Positive | 3193661 - 3195262 | 54293.9 |
| short-chain dehydrogenase/reductase sdr | H480_15461 | Not Available | Negative | 3195385 - 3196314 | 32942.0 |
| amino acid/polyamine/organocation transporter, apc superfamily protein | H480_15466 | Not Available | Negative | 3196369 - 3198375 | 72849.8 |
| hypothetical protein | H480_15471 | Not Available | Positive | 3198551 - 3198856 | 10950.2 |
| two-component system sensor kinase | H480_15476 | Not Available | Positive | 3199103 - 3200602 | 54422.7 |
| hypothetical protein | H480_15481 | Not Available | Negative | 3200710 - 3201210 | 17807.2 |
| translation factor | H480_15486 | Not Available | Positive | 3201372 - 3201992 | 22751.2 |
| wyosine base formation | H480_15491 | Not Available | Negative | 3201996 - 3202682 | 24923.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
