Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H480_12879 | Not Available | Negative | 2634706 - 2635500 | 27641.2 |
| o-methyltransferase | H480_12884 | Not Available | Negative | 2635626 - 2636594 | 34391.3 |
| hypothetical protein | H480_12889 | Not Available | Negative | 2636591 - 2636916 | 11225.6 |
| coproporphyrinogen iii oxidase | H480_12894 | Not Available | Negative | 2636992 - 2637822 | 30761.3 |
| pyridoxamine 5'-phosphate oxidase | H480_12899 | Not Available | Negative | 2639492 - 2639929 | 16049.1 |
| membrane protein | H480_12904 | Not Available | Positive | 2639992 - 2641467 | 53975.0 |
| hypothetical protein | H480_12909 | Not Available | Positive | 2641467 - 2642267 | 28623.9 |
| hypothetical protein | H480_12914 | Not Available | Positive | 2642279 - 2645415 | 112481.0 |
| hypothetical protein | H480_12919 | Not Available | Positive | 2645598 - 2645999 | 13662.0 |
| marr family transcriptional regulator | H480_12924 | Not Available | Negative | 2645996 - 2646418 | 15772.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
