Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | H480_12767 | Not Available | Positive | 2611353 - 2612360 | 36115.6 |
| hypothetical protein | H480_12784 | Not Available | Negative | 2614611 - 2614876 | 9224.14 |
| serine phosphatase rsbu, regulator of sigma subunit | H480_12789 | Not Available | Negative | 2614873 - 2616099 | 43567.3 |
| stage ii sporulation e | H480_12794 | Not Available | Negative | 2616068 - 2616550 | 17173.3 |
| anti-sigma-factor antagonist | H480_12799 | Not Available | Negative | 2616550 - 2616882 | 11968.5 |
| glycogen debranching protein glgx | H480_12804 | Not Available | Negative | 2616879 - 2619107 | 80873.0 |
| anti-sigma-factor antagonist | H480_12809 | Not Available | Negative | 2619133 - 2619468 | 11702.3 |
| hypothetical protein | H480_12814 | Not Available | Negative | 2619496 - 2621304 | 68435.2 |
| thij/pfpi domain-containing protein | H480_12819 | Not Available | Negative | 2621349 - 2621981 | 23526.3 |
| thiamine pyrophosphate tpp binding domain-containing protein | H480_12824 | Not Available | Negative | 2621981 - 2623597 | 56468.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
