Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaconate coa-transferase subunit a | H480_09823 | Not Available | Positive | 2016292 - 2017101 | 29185.8 |
| glutaconate coa-transferase subunit b | H480_09828 | Not Available | Positive | 2017098 - 2017856 | 26529.7 |
| acetyl-coa acyltransferase | H480_09833 | Not Available | Positive | 2017989 - 2019170 | 40873.4 |
| protocatechuate 3,4-dioxygenase, beta subunit | H480_09838 | Not Available | Positive | 2019182 - 2019916 | 27683.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | H480_09843 | Not Available | Positive | 2019916 - 2020470 | 19835.2 |
| 3-oxoadipate enol-lactonase | H480_09848 | Not Available | Positive | 2020467 - 2021243 | 27467.0 |
| carboxymuconolactone decarboxylase | H480_09853 | Not Available | Positive | 2021240 - 2021641 | 14294.8 |
| iclr family transcriptional regulator | H480_09858 | Not Available | Positive | 2021652 - 2022485 | 29584.4 |
| hypothetical protein | H480_09863 | Not Available | Positive | 2022693 - 2023277 | 19522.5 |
| moxr-like atpase | H480_09868 | Not Available | Positive | 2023219 - 2024175 | 35000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
