Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atpase | H480_09723 | Not Available | Positive | 1997348 - 1998871 | 53534.8 |
| sugar abc transporter permease | H480_09728 | Not Available | Positive | 1998868 - 1999881 | 34597.3 |
| gntr family transcriptional regulator | H480_09733 | Not Available | Negative | 1999993 - 2000715 | 25940.8 |
| hypothetical protein | H480_09738 | Not Available | Positive | 2000796 - 2001134 | 12639.9 |
| oxidoreductase | H480_09743 | Not Available | Positive | 2001139 - 2002107 | 35000.6 |
| amidohydrolase | H480_09748 | Not Available | Positive | 2002104 - 2002955 | 30296.8 |
| rna polymerase sigma-70 factor, ecf subfamily protein | H480_09753 | Not Available | Negative | 2002989 - 2003645 | 23729.5 |
| hypothetical protein | H480_09758 | Not Available | Negative | 2003899 - 2004195 | 9827.09 |
| hypothetical protein | H480_09763 | Not Available | Negative | 2004368 - 2004721 | 12102.1 |
| gtra-like protein | H480_09768 | Not Available | Negative | 2004837 - 2005316 | 17340.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
