Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | H480_08863 | Not Available | Negative | 1822077 - 1823912 | 64321.0 |
| 5-deoxy-glucuronate isomerase | H480_08868 | Not Available | Negative | 1823909 - 1824799 | 32330.7 |
| hypothetical protein | H480_08873 | Not Available | Negative | 1824796 - 1825686 | 31089.6 |
| 5-dehydro-2-deoxygluconokinase | H480_08878 | Not Available | Negative | 1825683 - 1826612 | 32139.4 |
| sugar abc transporter atpase | H480_08883 | Not Available | Negative | 1826647 - 1827426 | 28143.1 |
| sugar abc transporter permease | H480_08888 | Not Available | Negative | 1827423 - 1828466 | 36523.2 |
| sugar abc transporter periplasmic protein | H480_08893 | Not Available | Negative | 1828463 - 1829458 | 33537.6 |
| inosose dehydratase | H480_08898 | Not Available | Negative | 1829482 - 1830342 | 30200.7 |
| laci family transcriptional regulator | H480_08903 | Not Available | Positive | 1830475 - 1831494 | 35900.9 |
| myo-inositol 2-dehydrogenase | H480_08908 | Not Available | Positive | 1831491 - 1832489 | 34756.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
