Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein luxr | H480_07568 | Not Available | Positive | 1557940 - 1559434 | 52482.8 |
| hypothetical protein | H480_07573 | Not Available | Positive | 1559435 - 1560419 | 33638.1 |
| hypothetical protein | H480_07578 | Not Available | Positive | 1560416 - 1561195 | 28468.1 |
| hypothetical protein | H480_07583 | Not Available | Positive | 1561197 - 1561922 | 24904.8 |
| hypothetical protein | H480_07588 | Not Available | Positive | 1561919 - 1562866 | 34476.9 |
| hypothetical protein | H480_07593 | Not Available | Positive | 1562863 - 1563591 | 26574.6 |
| putative virulence factor (pectin lyase fold protein) | H480_07598 | Not Available | Positive | 1563603 - 1565123 | 50929.2 |
| hypothetical protein | H480_07603 | Not Available | Positive | 1566017 - 1566340 | 11328.5 |
| rhs protein | H480_07608 | Not Available | Negative | 1566348 - 1568737 | 87710.7 |
| padr family transcriptional regulator | H480_07613 | Not Available | Positive | 1568738 - 1569188 | 16038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
