Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | H480_07148 | Not Available | Negative | 1472841 - 1473725 | 32157.7 |
| transmembrane protein | H480_07153 | Not Available | Positive | 1473832 - 1474521 | 24946.5 |
| geranylgeranyl pyrophosphate synthase | H480_07158 | Not Available | Positive | 1474595 - 1475686 | 37522.6 |
| phytoene dehydrogenase | H480_07163 | Not Available | Positive | 1475688 - 1477157 | 52032.5 |
| hypothetical protein | H480_07168 | Not Available | Positive | 1477207 - 1477986 | 28606.8 |
| hypothetical protein | H480_07173 | Not Available | Negative | 1477991 - 1478512 | 18248.5 |
| integral membrane protein | H480_07178 | Not Available | Positive | 1478535 - 1478646 | 3722.64 |
| cellulose 1,4-beta-cellobiosidase | H480_07183 | Not Available | Negative | 1478756 - 1480582 | 63355.2 |
| glycoside hydrolase | H480_07188 | Not Available | Negative | 1480616 - 1482145 | 53473.6 |
| cellulose 1,4-beta-cellobiosidase | H480_07193 | Not Available | Negative | 1482156 - 1485074 | 102786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
