Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | H480_05854 | Not Available | Positive | 1231210 - 1232898 | 60051.0 |
| hypothetical protein | H480_05859 | Not Available | Negative | 1232961 - 1233317 | 12990.2 |
| hypothetical protein | H480_05864 | Not Available | Negative | 1233509 - 1233826 | 11921.1 |
| peptidyl-trna hydrolase | H480_05869 | Not Available | Negative | 1233847 - 1234440 | 20907.1 |
| 50s ribosomal protein l25/general stress protein ctc | H480_05874 | Not Available | Negative | 1234450 - 1235049 | 21209.0 |
| hypothetical protein | H480_05879 | Not Available | Positive | 1235403 - 1236536 | 39080.3 |
| nad-dependent epimerase/dehydratase | H480_05884 | Not Available | Positive | 1236635 - 1237276 | 22806.6 |
| coenzyme f420-dependent n5,n10-methenyltetrahydromethanopterin reductase | H480_05889 | Not Available | Negative | 1237270 - 1238136 | 31774.7 |
| ribose-phosphate pyrophosphokinase | H480_05894 | Not Available | Negative | 1238246 - 1239226 | 35792.0 |
| n-acetylglucosamine-1-phosphate uridyltransferase | H480_05899 | Not Available | Negative | 1239223 - 1240695 | 50241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
