Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | EBMC1_16654 | Not Available | Positive | 3475951 - 3476577 | 22083.3 |
| dna-directed dna polymerase | EBMC1_16659 | Not Available | Positive | 3476565 - 3477557 | 35736.4 |
| methionyl-trna ligase | EBMC1_16664 | Not Available | Positive | 3477596 - 3479164 | 58785.4 |
| tatd-related deoxyribonuclease | EBMC1_16669 | Not Available | Positive | 3479164 - 3479940 | 28198.0 |
| beta-lactamase-like protein | EBMC1_16674 | Not Available | Positive | 3480068 - 3480718 | 23854.4 |
| mazg family protein | EBMC1_16679 | Not Available | Positive | 3481058 - 3481741 | 24508.6 |
| hsr1-like gtp-binding protein | EBMC1_16684 | Not Available | Negative | 3481719 - 3483059 | 48981.6 |
| rna-binding protein hfq | EBMC1_16689 | Not Available | Negative | 3483068 - 3483562 | 18341.2 |
| two component, sigma54 specific, fis family transcriptional regulator | EBMC1_16694 | Not Available | Negative | 3483680 - 3485059 | 50677.7 |
| multi-sensor signal transduction histidine kinase | EBMC1_16699 | Not Available | Negative | 3485049 - 3487340 | 83123.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
