Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein ychf | EBMC1_10194 | Not Available | Positive | 2108575 - 2109672 | 39072.5 |
| merr family transcriptional regulator | EBMC1_10199 | Not Available | Negative | 2109791 - 2110192 | 14454.3 |
| hypothetical protein | EBMC1_10204 | Not Available | Positive | 2110261 - 2110974 | 26238.4 |
| copper-resistance protein copa | EBMC1_10209 | Not Available | Positive | 2110971 - 2112674 | 61416.8 |
| copper resistance protein copb | EBMC1_10214 | Not Available | Positive | 2112899 - 2113690 | 27934.8 |
| twin-arginine translocation pathway signal | EBMC1_10219 | Not Available | Positive | 2113770 - 2115338 | 58100.9 |
| peptidase m28 | EBMC1_10224 | Not Available | Negative | 2115359 - 2116966 | 57997.8 |
| nucleotide pyrophosphatase family protein | EBMC1_10229 | Not Available | Positive | 2117046 - 2118338 | 47210.6 |
| hypothetical protein | EBMC1_10234 | Not Available | Negative | 2118387 - 2118932 | 19371.6 |
| enoyl-coa hydratase | EBMC1_10239 | Not Available | Negative | 2119034 - 2119792 | 26347.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
