Sphingopyxis sp. MC1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. MC1 is a rod-shaped bacterium primarily found in activated sludge environments. This organism is characterized by possessing a single replicon, which is significant for its genetic and reproductive processes. The strain has been cataloged under the accession number AOUN00000000.1, indicating its documented presence in microbiological databases. The habitat of Sphingopyxis sp. MC1 suggests its potential role in wastewater treatment processes, where activated sludge is utilized to degrade organic pollutants. Bacteria in this habitat are often critical for the maintenance of ecological balance and nutrient cycling. The presence of Sphingopyxis sp. MC1 in activated sludge could imply its involvement in bioremediation and the breakdown of complex organic materials, contributing to the overall efficiency of wastewater treatment systems. In summary, Sphingopyxis sp. MC1, with its rod shape and single replicon, exemplifies a bacterial strain adapted to activated sludge environments, highlighting its potential ecological importance in pollutant degradation and wastewater management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. MC1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. MC1


Gene Summary

Adenine Count

640752 bp

Thymine Count

632417 bp

Guanine Count

1178185 bp

Cytosine Count

1202109 bp

Genome Length

3653464 bp

Protein-coding Genes

3419 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two component, sigma54 specific, fis family transcriptional regulatorEBMC1_16704Not AvailableNegative3487446 - 348886751312.3
signal transduction histidine kinase, nitrogen specific, ntrbEBMC1_16709Not AvailableNegative3488864 - 348996739451.4
dihydrouridine synthase tim-barrel protein nifr3EBMC1_16714Not AvailableNegative3489964 - 349096236121.6
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseEBMC1_16719Not AvailablePositive3491060 - 349224440418.4
cina-like proteinEBMC1_16724Not AvailablePositive3492365 - 349280515371.0
cyclase/dehydraseEBMC1_16729Not AvailableNegative3492748 - 349322717893.4
lipoyl synthaseEBMC1_16734Not AvailableNegative3493235 - 349418835166.4
carbonate dehydrataseEBMC1_16739Not AvailablePositive3494225 - 349486323348.8
cl- channel voltage-gated family proteinEBMC1_16744Not AvailablePositive3494912 - 349625546287.4
hypothetical proteinEBMC1_16749Not AvailableNegative3496303 - 349665313527.1

Displaying genes 3361 – 3370 of 3516 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.