Sphingopyxis sp. MC1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. MC1 is a rod-shaped bacterium primarily found in activated sludge environments. This organism is characterized by possessing a single replicon, which is significant for its genetic and reproductive processes. The strain has been cataloged under the accession number AOUN00000000.1, indicating its documented presence in microbiological databases. The habitat of Sphingopyxis sp. MC1 suggests its potential role in wastewater treatment processes, where activated sludge is utilized to degrade organic pollutants. Bacteria in this habitat are often critical for the maintenance of ecological balance and nutrient cycling. The presence of Sphingopyxis sp. MC1 in activated sludge could imply its involvement in bioremediation and the breakdown of complex organic materials, contributing to the overall efficiency of wastewater treatment systems. In summary, Sphingopyxis sp. MC1, with its rod shape and single replicon, exemplifies a bacterial strain adapted to activated sludge environments, highlighting its potential ecological importance in pollutant degradation and wastewater management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. MC1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. MC1 contigEBMC1_24, whole genome shotgun

Gene Summary

Adenine Count

640752 bp

Thymine Count

632417 bp

Guanine Count

1178185 bp

Cytosine Count

1202109 bp

Genome Length

3653464 bp

Protein-coding Genes

3419 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenase/reductase sdrEBMC1_15834Not AvailableNegative3299486 - 330018724817.7
luxr family transcriptional regulatorEBMC1_15839Not AvailableNegative3300299 - 330088621087.6
gtp cyclohydrolase iEBMC1_15844Not AvailablePositive3301024 - 33012126979.33
putative transposaseEBMC1_15849Not AvailableNegative3301234 - 330203130114.0
transposase is3/is911 family proteinEBMC1_15854Not AvailableNegative3302031 - 330238112943.4
is4 family transposaseEBMC1_15859Not AvailableNegative3302516 - 330388951838.7
hypothetical proteinEBMC1_15864Not AvailableNegative3303992 - 330437514435.2
aldo/keto reductaseEBMC1_15869Not AvailableNegative3304551 - 330554635956.0
sodium:dicarboxylate symporterEBMC1_15874Not AvailableNegative3305543 - 330679042288.3
phosphoglucosamine mutaseEBMC1_15879Not AvailablePositive3306898 - 330823846911.7

Displaying genes 3181 – 3190 of 3516 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.