Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EBMC1_11110 | Not Available | Negative | 2298177 - 2299664 | 53659.2 |
| merr family transcriptional regulator | EBMC1_11115 | Not Available | Negative | 2300361 - 2300759 | 14464.4 |
| glutaredoxin | EBMC1_11120 | Not Available | Positive | 2300840 - 2301661 | 29936.0 |
| hypothetical protein | EBMC1_11125 | Not Available | Positive | 2301764 - 2302126 | 12491.5 |
| hypothetical protein | EBMC1_11130 | Not Available | Positive | 2302191 - 2302457 | 9534.52 |
| czcc family heavy metal rnd efflux outer membrane protein | EBMC1_11135 | Not Available | Positive | 2302524 - 2303750 | 43847.9 |
| secretion protein hlyd | EBMC1_11140 | Not Available | Positive | 2303747 - 2304973 | 42400.1 |
| heavy metal efflux pump czca | EBMC1_11145 | Not Available | Positive | 2304970 - 2308104 | 112744.0 |
| putative copper efflux system periplasmic protein cusf | EBMC1_11150 | Not Available | Positive | 2308101 - 2308469 | 12577.2 |
| transcriptional regulator, merr family protein | EBMC1_11155 | Not Available | Negative | 2308554 - 2308955 | 14374.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
