Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpib/laca/lacb family sugar-phosphate isomerase | EBMC1_09804 | Not Available | Positive | 2027815 - 2028267 | 15779.7 |
| serine hydroxymethyltransferase | EBMC1_09809 | Not Available | Positive | 2028264 - 2029571 | 46089.9 |
| hypothetical protein | EBMC1_09814 | Not Available | Positive | 2029577 - 2029795 | 7621.41 |
| transcriptional regulator nrdr | EBMC1_09819 | Not Available | Positive | 2029799 - 2030263 | 17586.8 |
| trna/rrna methyltransferase spou | EBMC1_09824 | Not Available | Positive | 2030860 - 2031525 | 23786.2 |
| chorismate mutase | EBMC1_09829 | Not Available | Negative | 2031676 - 2031984 | 11557.8 |
| 30s ribosomal protein s4 | EBMC1_09834 | Not Available | Positive | 2032183 - 2032794 | 23103.1 |
| peptidase m28 | EBMC1_09839 | Not Available | Positive | 2032911 - 2034608 | 60820.2 |
| peptidyl-arginine deiminase | EBMC1_09844 | Not Available | Positive | 2034623 - 2035606 | 34935.4 |
| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase | EBMC1_09849 | Not Available | Positive | 2035958 - 2036836 | 32215.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
