Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf subfamily rna polymerase sigma-24 factor | EBMC1_09709 | Not Available | Negative | 2008591 - 2009163 | 20832.7 |
| endonuclease/exonuclease/phosphatase | EBMC1_09714 | Not Available | Positive | 2009269 - 2010333 | 37647.2 |
| hypothetical protein | EBMC1_09719 | Not Available | Negative | 2010315 - 2011052 | 25620.4 |
| long-chain-fatty-acid--coa ligase | EBMC1_09724 | Not Available | Negative | 2011123 - 2012877 | 63004.0 |
| recombination protein f | EBMC1_09729 | Not Available | Negative | 2012998 - 2014107 | 38426.2 |
| phage shock protein c, pspc | EBMC1_09734 | Not Available | Positive | 2014548 - 2014727 | 6502.23 |
| sensor signal transduction histidine kinase | EBMC1_09739 | Not Available | Negative | 2014836 - 2016242 | 50796.1 |
| two component transcriptional regulator | EBMC1_09744 | Not Available | Negative | 2016245 - 2016910 | 24593.2 |
| hypothetical protein | EBMC1_09749 | Not Available | Negative | 2017011 - 2017325 | 11366.8 |
| Trna-val | Not Available | Not Available | Positive | 2017423 - 2017497 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
