Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | EBMC1_08761 | Not Available | Positive | 1801746 - 1802267 | 19222.4 |
| peptidoglycan glycosyltransferase | EBMC1_08766 | Not Available | Positive | 1802329 - 1804236 | 69050.8 |
| rod shape-determining protein roda | EBMC1_08771 | Not Available | Positive | 1804233 - 1805339 | 39597.7 |
| abc-type transport system permease component | EBMC1_08776 | Not Available | Negative | 1805365 - 1806564 | 42574.9 |
| abc-type transport system atpase component | EBMC1_08781 | Not Available | Negative | 1806564 - 1807286 | 26533.0 |
| rnd family efflux transporter mfp subunit | EBMC1_08786 | Not Available | Negative | 1807283 - 1808587 | 45876.6 |
| putative outer membrane protein | EBMC1_08791 | Not Available | Negative | 1808584 - 1810008 | 49274.0 |
| Trna-lys | Not Available | Not Available | Positive | 1810350 - 1810425 | Not Available |
| phage integrase | EBMC1_08796 | Not Available | Negative | 1810588 - 1810917 | 12453.2 |
| integrase family protein | EBMC1_08801 | Not Available | Negative | 1811144 - 1811809 | 25754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
