Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | EBMC1_06089 | Not Available | Negative | 1260383 - 1260676 | 11051.3 |
| transcription termination factor rho | EBMC1_06094 | Not Available | Negative | 1260683 - 1261939 | 46597.1 |
| hypothetical protein | EBMC1_06099 | Not Available | Negative | 1262132 - 1262584 | 17331.9 |
| uroporphyrinogen decarboxylase | EBMC1_06104 | Not Available | Negative | 1262589 - 1263617 | 36479.9 |
| pep synthetase regulatory protein | EBMC1_06109 | Not Available | Positive | 1263954 - 1264772 | 30249.1 |
| maf protein | EBMC1_06114 | Not Available | Positive | 1264769 - 1265368 | 21161.5 |
| shikimate 5-dehydrogenase | EBMC1_06119 | Not Available | Positive | 1265335 - 1266189 | 29663.0 |
| dephospho-coa kinase | EBMC1_06124 | Not Available | Positive | 1266186 - 1266809 | 23126.4 |
| dna polymerase iii subunit epsilon | EBMC1_06129 | Not Available | Positive | 1266829 - 1267530 | 25619.8 |
| sigma 54 modulation protein/ribosomal protein s30ea | EBMC1_06134 | Not Available | Positive | 1267578 - 1268153 | 20981.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
