Campylobacter showae CC57C

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter showae CC57C is a Gram-negative bacterium classified within the Campylobacter genus. Notably, it requires oxygen for growth, categorizing it as an aerobe. This oxygen requirement is a significant trait, as it influences the ecological niches C. showae can inhabit and its interactions in various environments. The strain CC57C is characterized by having a single replicon, which is an important genetic feature that can impact its replication and stability within its environment. This single-replicon structure can also be indicative of its evolutionary adaptations and potential metabolic capabilities. The genomic data for Campylobacter showae CC57C is accessible under the accession number AOTD00000000.1, which allows for further exploration of its genetic characteristics and functional attributes. Understanding these genomic features can provide insights into the organism's physiology and potential applications in microbiology. Ecologically, the aerobic nature of C. showae suggests that it may play a role in environments where oxygen is available, potentially influencing microbial communities and contributing to nutrient cycling. The presence of this bacterium in various habitats could also indicate its adaptability and significance in specific ecological niches, though further studies would be necessary to elucidate its full ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter showae
StrainCC57C

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter showae CC57C
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter showae CC57C


Gene Summary

Adenine Count

601777 bp

Thymine Count

596387 bp

Guanine Count

498260 bp

Cytosine Count

496343 bp

Genome Length

2192767 bp

Protein-coding Genes

2186 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s13H740_10497Not AvailablePositive1951969 - 195233713770.9
30s ribosomal protein s11H740_10502Not AvailablePositive1952347 - 195273913876.1
30s ribosomal protein s4H740_10507Not AvailablePositive1952762 - 195338823954.2
dna-directed rna polymerase subunit alphaH740_10512Not AvailablePositive1953403 - 195441637312.8
50s ribosomal protein l17H740_10517Not AvailablePositive1954428 - 195478413317.3
nifu family proteinH740_10522Not AvailablePositive1955292 - 19555619878.17
hypothetical proteinH740_10527Not AvailablePositive1955554 - 195609920713.8
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseH740_10532Not AvailablePositive1956083 - 195737547024.4
hypothetical proteinH740_10537Not AvailableNegative1957451 - 19576367127.8
aspartate alpha-decarboxylaseH740_10542Not AvailablePositive1957647 - 195799412659.5

Displaying genes 2021 – 2030 of 2264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

193 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002026acrylateC3H3O2Chemical structure of acrylate10344-93-1
Average71.056Da
Monoisotopic71.013852917Da

Displaying 1–10 of 193 metabolites

Health Effects

No health effects information available for this bacterium.