Microbacterium sp. UCD-TDU

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. UCD-TDU is a rod-shaped bacterium characterized by a single replicon. This structural feature is significant as it typically indicates a streamlined genome organization, which can be associated with specific ecological niches or adaptive strategies. The bacterium is cataloged under the accession number AOSO00000000.1, which allows for its identification and retrieval in genomic databases, facilitating further research and comparison with related microbial species. Rod-shaped bacteria, such as Microbacterium sp. UCD-TDU, are known for their diverse ecological roles, often found in soil and water environments. Their morphology can influence their motility and nutrient absorption, which may contribute to their adaptability in various habitats. Understanding the traits of Microbacterium sp. UCD-TDU can provide insights into its potential applications in biotechnology or environmental microbiology. For instance, rod-shaped bacteria often play crucial roles in nutrient cycling and organic matter decomposition, suggesting that Microbacterium sp. UCD-TDU may contribute to soil health and ecosystem functioning. In summary, the rod shape and single replicon of Microbacterium sp. UCD-TDU highlight its potential adaptability and ecological significance, warranting further investigation into its functional roles in natural environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. UCD-TDU
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. UCD-TDU contig_15, whole genome shotgun

Gene Summary

Adenine Count

590359 bp

Thymine Count

594475 bp

Guanine Count

1282724 bp

Cytosine Count

1278289 bp

Genome Length

3745877 bp

Protein-coding Genes

3532 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductaseD514_0112005Not AvailableNegative2356610 - 235763836412.4
polynucleotide phosphorylaseD514_0112010Not AvailableNegative2357859 - 236013580266.5
udp-glucose 6-dehydrogenaseD514_0112015Not AvailablePositive2360496 - 236180645588.4
glycosyl transferaseD514_0112020Not AvailableNegative2361826 - 236376669824.8
hypothetical proteinD514_0112025Not AvailablePositive2363898 - 236449120441.6
c4-dicarboxylate transporterD514_0112035Not AvailableNegative2364754 - 236619350742.1
atpaseD514_0112040Not AvailablePositive2366340 - 236762344750.4
chemotaxis protein cheyD514_0112045Not AvailablePositive2367620 - 236830925170.1
fad-linked oxidaseD514_0112050Not AvailableNegative2368313 - 236960245160.7
nadph-dependent fmn reductaseD514_0112055Not AvailableNegative2369718 - 237036222284.4

Displaying genes 2331 – 2340 of 3640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.